{
  "_id": "6aca4616fe5cc25786e86560",
  "Package": "markovmix",
  "Title": "Mixture of Markov Chains with Support of Higher Orders and\nMultiple Sequences",
  "Version": "0.1.3",
  "Authors@R": "person(given = \"Xiurui\",\nfamily = \"Zhu\",\nrole = c(\"aut\", \"cre\"),\nemail = \"zxr6@163.com\",\ncomment = NULL)",
  "Maintainer": "Xiurui Zhu <zxr6@163.com>",
  "Description": "Fit mixture of Markov chains of higher orders from\nmultiple sequences. It is also compatible with ordinary\n1-component, 1-order or single-sequence Markov chains. Various\nutility functions are provided to derive transition patterns,\ntransition probabilities per component and component priors. In\naddition, print(), predict() and component extracting/replacing\nmethods are also defined as a convention of mixture models.",
  "License": "MIT + file LICENSE",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.2.3",
  "Collate": "'RcppExports.R' 'data.R' 'utils.R' 'markov_mix_utils.R'\n'markov_mix.R' 'markovmix-package.R'",
  "URL": "https://github.com/zhuxr11/markovmix",
  "BugReports": "https://github.com/zhuxr11/markovmix/issues",
  "Repository": "https://zhuxr11.r-universe.dev",
  "Date/Publication": "2023-12-02 10:41:40 UTC",
  "RemoteUrl": "https://github.com/zhuxr11/markovmix",
  "RemoteRef": "HEAD",
  "RemoteSha": "be31e6cef30d908801ef14208d05968785efff52",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-10-10 13:57:10 UTC",
    "User": "root"
  },
  "Author": "Xiurui Zhu [aut, cre]",
  "_user": "zhuxr11",
  "_type": "src",
  "_file": "markovmix_0.1.3.tar.gz",
  "_fileid": "https://r2.ropensci.org/df4065a5874ac1c04906fd5a6f5ae8027ecd0aacb43430b24d4ae58a88dc92c1",
  "_filesize": 172473,
  "_sha256": "df4065a5874ac1c04906fd5a6f5ae8027ecd0aacb43430b24d4ae58a88dc92c1",
  "_expires": "2027-01-18T14:05:09.000Z",
  "_created": "2026-10-10T13:57:10.000Z",
  "_published": "2026-10-10T14:05:10.731Z",
  "_buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 114229503911,
      "time": 94,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11671499476"
    },
    {
      "job": 114229503974,
      "time": 112,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11671574291"
    },
    {
      "job": 114229503907,
      "time": 91,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671442932"
    },
    {
      "job": 114229503935,
      "time": 115,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671372922"
    },
    {
      "job": 114229503942,
      "time": 104,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11671594670"
    },
    {
      "job": 114229503900,
      "time": 265,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11672270075"
    },
    {
      "job": 114229503948,
      "time": 102,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671807828"
    },
    {
      "job": 114229503965,
      "time": 324,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671138497"
    },
    {
      "job": 114229001073,
      "time": 166,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671522653"
    },
    {
      "job": 114229503895,
      "time": 98,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11671599428"
    },
    {
      "job": 114229503953,
      "time": 209,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11671919383"
    },
    {
      "job": 114229504006,
      "time": 130,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11671078220"
    },
    {
      "job": 114229504001,
      "time": 89,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11671539370"
    },
    {
      "job": 114229504027,
      "time": 188,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671549499"
    },
    {
      "job": 114229503930,
      "time": 95,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11671919153"
    }
  ],
  "_upstream": "https://github.com/zhuxr11/markovmix",
  "_commit": {
    "id": "be31e6cef30d908801ef14208d05968785efff52",
    "author": "zhuxr11 <zxr6@163.com>",
    "committer": "zhuxr11 <zxr6@163.com>",
    "message": "Update `README.md`.\n",
    "time": 1701513700
  },
  "_maintainer": {
    "name": "Xiurui Zhu",
    "email": "zxr6@163.com",
    "login": "zhuxr11",
    "description": "",
    "uuid": 62409053
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "dplyr",
      "version": ">= 1.0.8",
      "role": "Imports"
    },
    {
      "package": "forcats",
      "version": ">= 1.0.0",
      "role": "Imports"
    },
    {
      "package": "pillar",
      "version": ">= 1.9.0",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "version": ">= 0.3.4",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "version": ">= 1.1.0",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "version": ">= 3.1.6",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "version": ">= 1.2.0",
      "role": "Imports"
    },
    {
      "package": "bench",
      "version": ">= 1.1.2",
      "role": "Suggests"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "version": ">= 3.4.2",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.1.7",
      "role": "Suggests"
    }
  ],
  "_owner": "zhuxr11",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "zhuxr11",
      "count": 64,
      "uuid": 62409053
    }
  ],
  "_userbio": {
    "uuid": 62409053,
    "type": "user",
    "name": "zhuxr11",
    "followers": 3
  },
  "_downloads": {
    "count": 258,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/markovmix"
  },
  "_devurl": "https://github.com/zhuxr11/markovmix",
  "_searchresults": 4,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/markovmix.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE"
  ],
  "_homeurl": "https://github.com/zhuxr11/markovmix",
  "_realowner": "zhuxr11",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2023-04-24"
    },
    {
      "version": "0.1.1",
      "date": "2023-04-26"
    },
    {
      "version": "0.1.2",
      "date": "2023-05-27"
    },
    {
      "version": "0.1.3",
      "date": "2023-12-02"
    }
  ],
  "_exports": [
    "fit_markov_mix",
    "get_counts",
    "get_order",
    "get_prior",
    "get_prob",
    "get_states",
    "get_states_mat",
    "restate"
  ],
  "_datasets": [
    {
      "name": "markov_mix_ex",
      "title": "Mixture of Markov chain example",
      "object": "markov_mix_ex",
      "class": [
        "MarkovMix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "markovmix-package",
      "title": "markovmix package",
      "topics": [
        "markovmix-package"
      ]
    },
    {
      "page": "Extract.MarkovMix",
      "title": "Extract or replace components of MarkovMix object",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "Extract.MarkovMix",
        "[.MarkovMix",
        "[<-.MarkovMix",
        "`[.MarkovMix`",
        "`[<-.MarkovMix`"
      ]
    },
    {
      "page": "fit_markov_mix",
      "title": "Fit mixture of Markov chains",
      "topics": [
        "fit_markov_mix"
      ]
    },
    {
      "page": "get_counts",
      "title": "Get transition pattern counts from MarkovFit object",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "get_counts"
      ]
    },
    {
      "page": "get_order",
      "title": "Get the order of Markov chains",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "get_order"
      ]
    },
    {
      "page": "get_prior",
      "title": "Get component priors from MarkovFit object",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "get_prior"
      ]
    },
    {
      "page": "get_prob",
      "title": "Get probability matrix from MarkovFit object",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "get_prob"
      ]
    },
    {
      "page": "get_states",
      "title": "Get the states of Markov chains",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "get_states"
      ]
    },
    {
      "page": "get_states_mat",
      "title": "Get state transition patterns from MarkovFit object",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "get_states_mat"
      ]
    },
    {
      "page": "markov_mix_ex",
      "title": "Mixture of Markov chain example",
      "topics": [
        "markov_mix_ex"
      ]
    },
    {
      "page": "MarkovMix-class",
      "title": "MarkovMix class",
      "topics": [
        "MarkovMix",
        "MarkovMix-class"
      ]
    },
    {
      "page": "predict.MarkovMix",
      "title": "Predict probabilities with MarkovMix object and new sequence list",
      "concept": [
        "MarkovMix methods"
      ],
      "topics": [
        "predict.MarkovMix"
      ]
    },
    {
      "page": "print.MarkovMix",
      "title": "Print MarkovMix object",
      "concept": [
        "MarkovMix methods"
      ],
      "topics": [
        "print.MarkovMix"
      ]
    },
    {
      "page": "restate",
      "title": "Reorganize states in MarkovMix object",
      "concept": [
        "MarkovMix utilities"
      ],
      "topics": [
        "restate"
      ]
    }
  ],
  "_readme": "https://github.com/zhuxr11/markovmix/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "dplyr",
    "forcats",
    "generics",
    "glue",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "Rcpp",
    "rlang",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 2.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "markovmix",
  "_universes": [
    "zhuxr11"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-10-10T13:58:48.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/36ba127a63a89d73f4e4c82caa0708040e539dca1fa15121a893b226cfc6b5e9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-10-10T13:59:05.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/8ba6c44a645ee0acd9c8caab46ecd08e3dd8eae16e66088554852242c574f942",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-10-10T13:58:47.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/cfaad99fe3b1c9e3839fe72d16bc115da0e001ef43f7df8e674f8bccc67f0849",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-10-10T13:59:02.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/6052500a86ed9b9ced6efe04a6d7601f93d3a4cde08dd5266de3027be5b995fc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-10-10T14:01:22.000Z",
      "arch": "aarch64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/db22d119640c8101e0d4078f83056c9c458eca0309bc9ce8f828e47ac33ea77b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-10-10T14:02:48.000Z",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/85a233ca885d15114e25f97e3751033d7b66df0494f4be8bddb40cc2790728a8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-10-10T14:00:47.000Z",
      "arch": "aarch64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/406a1d035618e21714e9dee5ad3a7dc96be37e605b05e52624a966cd6c2e3705",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-10-10T14:02:33.000Z",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/9a75f55037164908c3560d48f176046c30b0f50cc6a023f7768635b9e8697a50",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.3",
      "date": "2026-10-10T13:59:06.000Z",
      "arch": "emscripten",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/d9ede908c3864fd84523ca0cc6e938bf3d7aa031e2621dc7b951305e6468f8cc",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-10-10T14:00:26.000Z",
      "arch": "aarch64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/597b77c8c40b0a4d79fb09efa548c871f18a1c2de3122dbae672f26c524f9884",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-10-10T13:58:19.000Z",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/3c33b27da4084420b94289a85a0f7ee78adc3450475c500fb225f2e3664c319a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-10-10T13:58:15.000Z",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/9d314c5ed13678bb81049b52c7631ab8acb20e9e5cd624f3ddd0cd7407dae28a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-10-10T14:00:04.000Z",
      "arch": "aarch64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/28020055ae232a53e624b8d7897d717a158bc289337f73dfe84348954e30f1ee",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-10-10T13:58:20.000Z",
      "arch": "x86_64",
      "commit": "be31e6cef30d908801ef14208d05968785efff52",
      "fileid": "https://r2.ropensci.org/2c23be853c3c43b659bf0591e260ce1eef1cfc6726bb9737499158f3d84a98e5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zhuxr11/actions/runs/38057529124"
    }
  ]
}